#!/bin/bash

#
# as our first order of business, determine which LAP instance is running
#
if [ -z "${LAPINSTANCE}" ]; then
  host=${HOSTNAME};
  if [ -z "${host}" ]; then host=$(hostnmae); fi
  if [ "${host}" = "ps.hpc.uio.no" ]; then
    LAPINSTANCE=development;
  elif [ "${host}" = "at.hpc.uio.no" ]; then
    LAPINSTANCE=production;
  elif [ "${host}" = "lap-test.hpc.uio.no" ]; then
    LAPINSTANCE=test;
  else
    LAPINSTANCE=local;
  fi
  export LAPINSTANCE;
fi

sudo -u laportal \
  svn up \
    /projects/lap/${LAPINSTANCE}/trunk/{library,tree} \
    /home/laportal/{operation,tools,www};

#
# for the March 2015 version, at least, changes to the tool configuration do
# not become visible unless this file, which is auto-generated at start-up, is
# removed.
#
sudo -u laportal \
  /bin/rm -f /home/laportal/galaxy/integrated_tool_panel.xml > /dev/null 2>&1

/etc/init.d/galaxyd restart;